Hey i reinstalled the game and set it up for the shifter and it work fine now.

Yes the clutch is set to axis

I have a g29 and the shifter. When i set the gear box to shifter the game picks up the button number and i have set each gear correctly. Sometimes if i start with the padal shifter then change to the real shifter in setting while moving it will work till i exit the settings menu. If anyone knows what is going on please tell me.